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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
BRCA rs77161425 chr8:52420369 T/C 1.04E-5 1017 21.17 22.67 20.68 KM Plot
BRCA rs77183160 chr20:30514190 A/C 3.44E-14 1020 21.3 24.28 8.5 KM Plot
BRCA rs77348110 chr18:44674167 T/C 6.58E-6 1027 21.77 21.58 18.13 KM Plot
BRCA rs77595279 chr7:54829056 ACT/A 7.89E-6 1028 21.43 23.83 12.17 KM Plot
BRCA rs77599321 chr18:44689642 T/C 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs77615793 chr18:44684464 C/G 5.05E-6 1027 21.7 21.67 18.23 KM Plot
BRCA rs77818628 chr6:43161133 G/A 1.72E-13 1017 21.7 20.9 10.73 KM Plot
BRCA rs7795817 chr7:87169037 C/T 1.25E-6 1028 21.47 22.2 21.18 KM Plot
BRCA rs781280 chr2:189657906 A/C 4.88E-5 1028 12.18 23.83 21.43 KM Plot
BRCA rs78160625 chr20:30498653 G/C 3.43E-14 1024 21.3 23.6 8.5 KM Plot
BRCA rs7832 chr6:43193877 A/G 2.78E-6 1028 10.73 20.73 21.68 KM Plot
BRCA rs78547658 chr18:44669852 C/T 6.71E-6 1026 21.73 21.58 18.13 KM Plot
BRCA rs78904615 chr18:44656759 A/T 2.04E-5 1021 21.77 22.2 18.03 KM Plot
BRCA rs79078752 chr18:44667462 A/G 6.71E-6 1026 21.73 21.58 18.13 KM Plot
BRCA rs79112960 chr2:86523600 T/C 2.18E-6 1027 21.88 19.47 12.17 KM Plot